engram.declarative package

Submodules

engram.declarative.engram module

This module defines Engram, the container for all offline analysis. It contains many Mneme objects that are:

• Labeled with their region of origin
• Organized into trial & channel subsections.

Each Engram has a unique event tag.

class engram.declarative.engram.Engram(engram, id='User', tag='Unspecified')

Bases: object

engram.declarative.id module

This module defines ID, the main container gathering all the data, whether discrete or continous, for a given recording session. It is the container for the Engram class.

class engram.declarative.id.ID(name=None, extension=None, project=None, settings=None, load=False)

Bases: object

Main container gathering all the data, whether discrete or continous, for a given recording session.

episode(shader='engram')

load(datadir='users')

loadEvents(session=None, extension='.nex')

loadTrace(method='name', session=None, manual=None, regions=None)

model(method='channels', model_type='CNN')

preprocess(settings=None)

save(datadir='users')

engram.declarative.mneme module

This module defines Mneme, our smallest unit of memory.

It is the container for standardized features associated with an event.

class engram.declarative.mneme.Mneme(id, raw=None, tag=None, settings=None)

Bases: object

Module contents

:mod:’engram.declarative’ provides classes for containing neurophysiology recordings and derivative features.

Classes from :mod:’engram.declarative’ return nested data structures containing one or more classes from this module.

Classes:

class engram.declarative.ID(name=None, extension=None, project=None, settings=None, load=False)

Main container gathering all the data, whether discrete or continous, for a given recording session.

class engram.declarative.Engram(engram, id='User', tag='Unspecified')

class engram.declarative.Mneme(id, raw=None, tag=None, settings=None)